Deuterium uptake curve data

Present deuterium uptake curve data

Usage

show_uc_data(uc_dat, theoretical = FALSE, fractional = FALSE)

Arguments

uc_dat

calculated kinetic data by calculate_kinetics or calculate_peptide_kinetics or create_kinetic_dataset function

theoretical

logical, indicator if values are calculated using theoretical controls

fractional

logical, indicator if values are shown in fractional form

Value

a data.frame object

Details

The function show_uptake_data generates a subsets of the uc_dat based on selected parameters. The numerical values are rounded to 4 places. The names of columns are changed to user-friendly ones.

See also

read_hdx calculate_kinetics calculate_peptide_kinetics

Examples

uc_dat <- calculate_kinetics(alpha_dat, protein = "db_eEF1Ba",
                             sequence = "GFGDLKSPAGL", 
                             state = "ALPHA_Gamma",
                             start = 1, end = 11,
                             time_0 = 0.001, time_100 = 1440)
#> Error in eval(jsub, SDenv, parent.frame()): object 'Protein' not found
show_uc_data(uc_dat)
#> Error: object 'uc_dat' not found