Differential deuterium uptake data
show_diff_uptake_data.Rd
Present differential deuterium uptake values in selected form
Usage
show_diff_uptake_data(
diff_uptake_dat,
theoretical = FALSE,
fractional = FALSE,
renamed = TRUE
)
Arguments
- diff_uptake_dat
data produced by
create_diff_uptake_dataset
function- theoretical
logical
, indicator if values are calculated using theoretical controls- fractional
logical
, indicator if values are shown in fractional form- renamed
logical
, indicator if the names of the columns are renamed to user-friendly ones. Currently FALSE not implemented.
Value
a data.frame
object
Details
The function show_uptake_data
generates a subsets
of the diff_uptake_dat based on selected parameters.
The numerical values are rounded to 4 places. The names of columns
are changed to user-friendly ones.
Examples
diff_uptake_dat <- create_diff_uptake_dataset(alpha_dat)
head(show_diff_uptake_data(diff_uptake_dat))
#> Protein ID Sequence Modification Start End Exposure Diff DU [Da]
#> <char> <int> <char> <lgcl> <int> <int> <num> <num>
#> 1: db_eEF1Ba 1 GFGDLKSPAGL NA 1 11 0.167 0.0745
#> 2: db_eEF1Ba 1 GFGDLKSPAGL NA 1 11 1.000 0.4316
#> 3: db_eEF1Ba 1 GFGDLKSPAGL NA 1 11 5.000 0.3947
#> 4: db_eEF1Ba 1 GFGDLKSPAGL NA 1 11 25.000 0.5304
#> 5: db_eEF1Ba 1 GFGDLKSPAGL NA 1 11 150.000 0.0670
#> 6: db_eEF1Ba 1 GFGDLKSPAGL NA 1 11 1440.000 0.0251
#> U(Diff DU) [Da]
#> <num>
#> 1: 0.0208
#> 2: 0.0391
#> 3: 0.0573
#> 4: 0.1068
#> 5: 0.0946
#> 6: 0.0551