Reconstructs protein sequence from supplied file.
reconstruct_sequence(dat, protein = dat[["Protein"]])
data read by
the protein of which the structure is to be reconstructed
reconstructed sequence -
The function reconstructs protein sequence from supplied experimental data. If a position is not covered, x is shown. First version doesn't support manual sequence length correction.
dat <- read_hdx(system.file(package = "HaDeX", "HaDeX/data/KD_180110_CD160_HVEM.csv")) reconstruct_sequence(dat)#>  "INITSSASQEGTRLNLICTVWHKKEEAEGFVVFLCKDRSGDCSPETSLKQLRLKRDPGIDGVGEISSQLMFTISQVTPLHSGTYQCCARSQKSGIRLQGHFFSILFxxxxxxxxxxxxxxxxxxFSHNEGTL"